Biofilm formation and regulation of salicylic acid-inducible genes expression in Arabidopsis by Algerian indigenous bacteria from wheat and potatoes rhizospheres in semi-arid Sétif region.
Identifieur interne : 000840 ( Main/Exploration ); précédent : 000839; suivant : 000841Biofilm formation and regulation of salicylic acid-inducible genes expression in Arabidopsis by Algerian indigenous bacteria from wheat and potatoes rhizospheres in semi-arid Sétif region.
Auteurs : Asma Benslim [Algérie] ; Samia Mezaache-Aichour [Algérie] ; Nora Haichour [Algérie] ; Kamel Aissat [Algérie] ; Mohamed Mihoub Zerroug [Algérie]Source :
- Archives of microbiology [ 1432-072X ] ; 2018.
Descripteurs français
- KwdFr :
- Acide salicylique (métabolisme), Algérie (MeSH), Arabidopsis (génétique), Arabidopsis (microbiologie), Arabidopsis (métabolisme), Bacillus (classification), Bacillus (isolement et purification), Biofilms (croissance et développement), Expression des gènes (MeSH), Fusarium (classification), Fusarium (isolement et purification), Lipopeptides (MeSH), Maladies des plantes (microbiologie), Phytophthora (classification), Phytophthora (isolement et purification), Pseudomonas (classification), Pseudomonas (isolement et purification), Rhizosphère (MeSH), Régulation de l'expression des gènes végétaux (génétique), Solanum tuberosum (métabolisme), Triticum (MeSH).
- MESH :
- croissance et développement : Biofilms.
- génétique : Arabidopsis, Régulation de l'expression des gènes végétaux.
- isolement et purification : Bacillus, Fusarium, Phytophthora, Pseudomonas.
- microbiologie : Arabidopsis, Maladies des plantes.
- métabolisme : Acide salicylique, Arabidopsis, Bacillus, Fusarium, Phytophthora, Pseudomonas, Solanum tuberosum.
- Algérie, Expression des gènes, Lipopeptides, Rhizosphère, Triticum.
English descriptors
- KwdEn :
- Algeria (MeSH), Arabidopsis (genetics), Arabidopsis (metabolism), Arabidopsis (microbiology), Bacillus (classification), Bacillus (isolation & purification), Biofilms (growth & development), Fusarium (classification), Fusarium (isolation & purification), Gene Expression (MeSH), Gene Expression Regulation, Plant (genetics), Lipopeptides (MeSH), Phytophthora (classification), Phytophthora (isolation & purification), Plant Diseases (microbiology), Pseudomonas (classification), Pseudomonas (isolation & purification), Rhizosphere (MeSH), Salicylic Acid (metabolism), Solanum tuberosum (metabolism), Triticum (MeSH).
- MESH :
- chemical , metabolism : Salicylic Acid.
- chemical : Lipopeptides.
- classification : Bacillus, Fusarium, Phytophthora, Pseudomonas.
- genetics : Arabidopsis, Gene Expression Regulation, Plant.
- growth & development : Biofilms.
- isolation & purification : Bacillus, Fusarium, Phytophthora, Pseudomonas.
- metabolism : Arabidopsis, Solanum tuberosum.
- microbiology : Arabidopsis, Plant Diseases.
- Algeria, Gene Expression, Rhizosphere, Triticum.
Abstract
45 bacterial isolates from potatoes and wheat rhizospheres near Sétif (Algeria) pre-selected for their antagonistic activity against three fungal plant pathogens, two necrotrophic Fusarium solani var. coeruleum and Phytophtora infestans, and a systemic F. oxysporum f. sp. albedinis. Molecular typing of the isolates showed abundance of Bacillus compared to Pseudomonas. Some of the tested strains have shown very high biofilm formation. Among the 24 Gram-positive bacilli screened for four cyclic lipopeptides genes, some isolates harbor two or more genes, while others have a single gene or have none. Four selected isolates were able to regulate the expression of six defense-related genes in Arabidopsis and produce salicylic acid. Upon the features assessed in this study, strain B. amyloliquefaciens A16 was selected for a subsequent use as seed treatment and biocontrol agent in semi-arid region fields. This strain showed important biofilm formation, regulation of Arabidopsis defenses, and harbored three cLPs genes.
DOI: 10.1007/s00203-018-1556-5
PubMed: 30032398
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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acid-inducible genes expression in Arabidopsis by Algerian indigenous bacteria from wheat and potatoes rhizospheres in semi-arid Sétif region.</title><author><name sortKey="Benslim, Asma" sort="Benslim, Asma" uniqKey="Benslim A" first="Asma" last="Benslim">Asma Benslim</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Ecological Microbiology, Department of Micobiology, Faculty of Nature and Life Sciences, University of Béjaïa, 06000, Béjaïa, Algeria. asmben2017@gmail.com.</nlm:affiliation><country xml:lang="fr">Algérie</country><wicri:regionArea>Laboratory of Ecological Microbiology, Department of Micobiology, Faculty of Nature and Life Sciences, University of Béjaïa, 06000, Béjaïa</wicri:regionArea><wicri:noRegion>Béjaïa</wicri:noRegion></affiliation></author><author><name sortKey="Mezaache Aichour, Samia" sort="Mezaache Aichour, Samia" uniqKey="Mezaache Aichour S" first="Samia" last="Mezaache-Aichour">Samia Mezaache-Aichour</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Applied Microbiology, Faculty of Nature and Life Sciences, University of Ferhat Abbas Sétif 1, 19000, Sétif, Algeria.</nlm:affiliation><country xml:lang="fr">Algérie</country><wicri:regionArea>Laboratory of Applied Microbiology, Faculty of Nature and Life Sciences, University of Ferhat Abbas Sétif 1, 19000, Sétif</wicri:regionArea><wicri:noRegion>Sétif</wicri:noRegion></affiliation></author><author><name sortKey="Haichour, Nora" sort="Haichour, Nora" uniqKey="Haichour N" first="Nora" last="Haichour">Nora Haichour</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Applied Microbiology, Faculty of Nature and Life Sciences, University of Ferhat Abbas Sétif 1, 19000, Sétif, Algeria.</nlm:affiliation><country xml:lang="fr">Algérie</country><wicri:regionArea>Laboratory of Applied Microbiology, Faculty of Nature and Life Sciences, University of Ferhat Abbas Sétif 1, 19000, 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Algeria.</nlm:affiliation><country xml:lang="fr">Algérie</country><wicri:regionArea>Laboratory of Applied Microbiology, Faculty of Nature and Life Sciences, University of Ferhat Abbas Sétif 1, 19000, Sétif</wicri:regionArea><wicri:noRegion>Sétif</wicri:noRegion></affiliation></author></analytic><series><title level="j">Archives of microbiology</title><idno type="eISSN">1432-072X</idno><imprint><date when="2018" type="published">2018</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Algeria (MeSH)</term><term>Arabidopsis (genetics)</term><term>Arabidopsis (metabolism)</term><term>Arabidopsis (microbiology)</term><term>Bacillus (classification)</term><term>Bacillus (isolation & purification)</term><term>Biofilms (growth & development)</term><term>Fusarium (classification)</term><term>Fusarium (isolation & purification)</term><term>Gene Expression (MeSH)</term><term>Gene Expression Regulation, Plant (genetics)</term><term>Lipopeptides (MeSH)</term><term>Phytophthora (classification)</term><term>Phytophthora (isolation & purification)</term><term>Plant Diseases (microbiology)</term><term>Pseudomonas (classification)</term><term>Pseudomonas (isolation & purification)</term><term>Rhizosphere (MeSH)</term><term>Salicylic Acid (metabolism)</term><term>Solanum tuberosum (metabolism)</term><term>Triticum (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Acide salicylique (métabolisme)</term><term>Algérie (MeSH)</term><term>Arabidopsis (génétique)</term><term>Arabidopsis (microbiologie)</term><term>Arabidopsis (métabolisme)</term><term>Bacillus (classification)</term><term>Bacillus (isolement et purification)</term><term>Biofilms (croissance et développement)</term><term>Expression des gènes (MeSH)</term><term>Fusarium (classification)</term><term>Fusarium (isolement et purification)</term><term>Lipopeptides (MeSH)</term><term>Maladies des plantes (microbiologie)</term><term>Phytophthora (classification)</term><term>Phytophthora (isolement et purification)</term><term>Pseudomonas (classification)</term><term>Pseudomonas (isolement et purification)</term><term>Rhizosphère (MeSH)</term><term>Régulation de l'expression des gènes végétaux (génétique)</term><term>Solanum tuberosum (métabolisme)</term><term>Triticum (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Salicylic Acid</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>Lipopeptides</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Bacillus</term><term>Fusarium</term><term>Phytophthora</term><term>Pseudomonas</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Biofilms</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Arabidopsis</term><term>Gene Expression Regulation, Plant</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Biofilms</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Arabidopsis</term><term>Régulation de l'expression des gènes végétaux</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Bacillus</term><term>Fusarium</term><term>Phytophthora</term><term>Pseudomonas</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Bacillus</term><term>Fusarium</term><term>Phytophthora</term><term>Pseudomonas</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Arabidopsis</term><term>Solanum tuberosum</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Arabidopsis</term><term>Maladies des plantes</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Arabidopsis</term><term>Plant Diseases</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Acide salicylique</term><term>Arabidopsis</term><term>Bacillus</term><term>Fusarium</term><term>Phytophthora</term><term>Pseudomonas</term><term>Solanum tuberosum</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Algeria</term><term>Gene Expression</term><term>Rhizosphere</term><term>Triticum</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Algérie</term><term>Expression des gènes</term><term>Lipopeptides</term><term>Rhizosphère</term><term>Triticum</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">45 bacterial isolates from potatoes and wheat rhizospheres near Sétif (Algeria) pre-selected for their antagonistic activity against three fungal plant pathogens, two necrotrophic Fusarium solani var. coeruleum and Phytophtora infestans, and a systemic F. oxysporum f. sp. albedinis. Molecular typing of the isolates showed abundance of Bacillus compared to Pseudomonas. Some of the tested strains have shown very high biofilm formation. Among the 24 Gram-positive bacilli screened for four cyclic lipopeptides genes, some isolates harbor two or more genes, while others have a single gene or have none. Four selected isolates were able to regulate the expression of six defense-related genes in Arabidopsis and produce salicylic acid. Upon the features assessed in this study, strain B. amyloliquefaciens A16 was selected for a subsequent use as seed treatment and biocontrol agent in semi-arid region fields. This strain showed important biofilm formation, regulation of Arabidopsis defenses, and harbored three cLPs genes.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">30032398</PMID><DateCompleted><Year>2018</Year><Month>12</Month><Day>11</Day></DateCompleted><DateRevised><Year>2018</Year><Month>12</Month><Day>11</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-072X</ISSN><JournalIssue CitedMedium="Internet"><Volume>200</Volume><Issue>9</Issue><PubDate><Year>2018</Year><Month>Nov</Month></PubDate></JournalIssue><Title>Archives of microbiology</Title><ISOAbbreviation>Arch Microbiol</ISOAbbreviation></Journal><ArticleTitle>Biofilm formation and regulation of salicylic acid-inducible genes expression in Arabidopsis by Algerian indigenous bacteria from wheat and potatoes rhizospheres in semi-arid Sétif region.</ArticleTitle><Pagination><MedlinePgn>1395-1405</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00203-018-1556-5</ELocationID><Abstract><AbstractText>45 bacterial isolates from potatoes and wheat rhizospheres near Sétif (Algeria) pre-selected for their antagonistic activity against three fungal plant pathogens, two necrotrophic Fusarium solani var. coeruleum and Phytophtora infestans, and a systemic F. oxysporum f. sp. albedinis. Molecular typing of the isolates showed abundance of Bacillus compared to Pseudomonas. Some of the tested strains have shown very high biofilm formation. Among the 24 Gram-positive bacilli screened for four cyclic lipopeptides genes, some isolates harbor two or more genes, while others have a single gene or have none. Four selected isolates were able to regulate the expression of six defense-related genes in Arabidopsis and produce salicylic acid. Upon the features assessed in this study, strain B. amyloliquefaciens A16 was selected for a subsequent use as seed treatment and biocontrol agent in semi-arid region fields. This strain showed important biofilm formation, regulation of Arabidopsis defenses, and harbored three cLPs genes.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Benslim</LastName><ForeName>Asma</ForeName><Initials>A</Initials><Identifier Source="ORCID">http://orcid.org/0000-0002-7660-2492</Identifier><AffiliationInfo><Affiliation>Laboratory of Ecological Microbiology, Department of Micobiology, Faculty of Nature and Life Sciences, University of Béjaïa, 06000, Béjaïa, Algeria. asmben2017@gmail.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Mezaache-Aichour</LastName><ForeName>Samia</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Laboratory of Applied Microbiology, Faculty of Nature and Life Sciences, University of Ferhat Abbas Sétif 1, 19000, Sétif, Algeria.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Haichour</LastName><ForeName>Nora</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Laboratory of Applied Microbiology, Faculty of Nature and Life Sciences, University of Ferhat Abbas Sétif 1, 19000, Sétif, Algeria.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Aissat</LastName><ForeName>Kamel</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Department of Microbiology and Biochemistry, Faculty of Nature and Life Sciences, University of Batna 2, 05000, Batna, Algeria.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zerroug</LastName><ForeName>Mohamed Mihoub</ForeName><Initials>MM</Initials><AffiliationInfo><Affiliation>Laboratory of Applied Microbiology, Faculty of Nature and Life Sciences, University of Ferhat Abbas Sétif 1, 19000, Sétif, Algeria.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>PNR project no: 1/u19/332</GrantID><Agency>Ministère de l'Enseignement Supérieur et de la recherche scientifique, République de l'Algérie</Agency><Country></Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2018</Year><Month>07</Month><Day>21</Day></ArticleDate></Article><MedlineJournalInfo><Country>Germany</Country><MedlineTA>Arch Microbiol</MedlineTA><NlmUniqueID>0410427</NlmUniqueID><ISSNLinking>0302-8933</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D055666">Lipopeptides</NameOfSubstance></Chemical><Chemical><RegistryNumber>O414PZ4LPZ</RegistryNumber><NameOfSubstance UI="D020156">Salicylic Acid</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000462" MajorTopicYN="N">Algeria</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017360" MajorTopicYN="N">Arabidopsis</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D001407" MajorTopicYN="N">Bacillus</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018441" MajorTopicYN="N">Biofilms</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005670" MajorTopicYN="N">Fusarium</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D015870" MajorTopicYN="N">Gene Expression</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D055666" MajorTopicYN="N">Lipopeptides</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010838" MajorTopicYN="N">Phytophthora</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011549" MajorTopicYN="N">Pseudomonas</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D058441" MajorTopicYN="N">Rhizosphere</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020156" MajorTopicYN="N">Salicylic Acid</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011198" MajorTopicYN="N">Solanum tuberosum</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014908" MajorTopicYN="N">Triticum</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Antagonism</Keyword><Keyword MajorTopicYN="N">Biocontrol</Keyword><Keyword MajorTopicYN="N">Biofilm</Keyword><Keyword MajorTopicYN="N">Cyclic lipopeptides</Keyword><Keyword MajorTopicYN="N">Induced systemic resistance</Keyword><Keyword MajorTopicYN="N">Rhizobacteria</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2018</Year><Month>03</Month><Day>28</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2018</Year><Month>07</Month><Day>18</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2018</Year><Month>07</Month><Day>16</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2018</Year><Month>7</Month><Day>23</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2018</Year><Month>12</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2018</Year><Month>7</Month><Day>23</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">30032398</ArticleId><ArticleId IdType="doi">10.1007/s00203-018-1556-5</ArticleId><ArticleId IdType="pii">10.1007/s00203-018-1556-5</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Algérie</li></country></list><tree><country name="Algérie"><noRegion><name sortKey="Benslim, Asma" sort="Benslim, Asma" uniqKey="Benslim A" first="Asma" last="Benslim">Asma Benslim</name></noRegion><name sortKey="Aissat, Kamel" sort="Aissat, Kamel" uniqKey="Aissat K" first="Kamel" last="Aissat">Kamel Aissat</name><name sortKey="Haichour, Nora" sort="Haichour, Nora" uniqKey="Haichour N" first="Nora" last="Haichour">Nora Haichour</name><name sortKey="Mezaache Aichour, Samia" sort="Mezaache Aichour, Samia" uniqKey="Mezaache Aichour S" first="Samia" last="Mezaache-Aichour">Samia Mezaache-Aichour</name><name sortKey="Zerroug, Mohamed Mihoub" sort="Zerroug, Mohamed Mihoub" uniqKey="Zerroug M" first="Mohamed Mihoub" last="Zerroug">Mohamed Mihoub Zerroug</name></country></tree></affiliations></record>Pour manipuler 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| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PhytophthoraV1
| This area was generated with Dilib version V0.6.38. |  |